Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015916272.1_cds_XP_016465976.1_58879
CDS Infomation

[gene=LOC107788775] [db_xref=GeneID:107788775] [protein=ATPase family AAA domain-containing protein 1-A-like] [partial=5'] [protein_id=XP_016465976.1] [location=complement(join(5601..5714,7556..7660,7918..7977,8106..8244,8358..8542,8704..8787,8866..9001,9382..9499,9592..9667,10039..10128,10215..10316,13975..14046,14131..14304,14390..14460,14572..>14668))] [gbkey=CDS]
Sequence

GGGTCCTCTAAAATTGGTGTCAGATTTGATAAATCAATCCCAGAGGGTAATGATCTTGGT
GGTCTGTGCGATGAAGATCATGGGTTCTTTTGTGCTGCTGACTTGCTCCGCCTTGATAGC
TCAAGTACTGATGAAATTGATAAACTTGCTATCAATGAACTCTTTGAGGTTGCTTCAAAT
GAAAGTAAAAGTAGTCCTCTAGTTTTGTTCATCAAAGACATTGAGAAGTCTATGGTGGGA
AACCCTGAGGCTTATGCTGCTTTCAAGATTAAGCTCGAACATTTGCCAGAGAATGTTGTT
GCCATAGCATCCCTTACCCAGTCGGACAACCGAAAGGAGAAATCGCATCCTGGTGGCCTG
CTATTTACGAAATTTGGAAGTAACCAAACGGCATTGCTTGACCTTGCCTTCCCCGATAAT
TTTGGTAGGCTGCATGATAGAAGCAAAGAAACCCCCAAGACAATGAAGCAGCTCACCCGC
CTGTTCCCCAACAAAGTTACCATACAGATTCCTCAGGATGAAACCTTATTATCAGACTGG
AAGCAACAGTTAGATCGGGATATGGAAACTATGAAATCTCAGTCAAACATAGCAAGCATT
CGCAATGTTTTGAATCGAATCAGAATTGATTGCCCTGAGCTGGAAACTTTATGCATAAAA
GATCAAGCCCTCACAAACGAAAGCGTTGAAAAGATAATCGGCTGGGCTTTGAGTCATCAC
TTTATGCATGAATCTGAGTCTTCTGTGAAGGACGCCAAGCTAGTTATCTCCGGTGAAAGG
TCAAATTTAATTTTCACTCTATGCTATCTACAGCCTTGCAAGGGAATATTGCTCTTTGGA
CCTCCAGGTACTGGCAAAACAATGCTTGCAAAAGCTGTTGCTACTGAGGCTGGTGCAAAC
TTTATAAACATATCAATGTCAAGCATTACGTCAAAGTGGTTCGGTGAAGGAGAGAAGTAT
GTCAAAGCAGTCTTCACGTTAGCTAGTAAAATAGCGTCTAGTGTTGTTTTTGTTGACGAG
GTGGATAGCATGTTAGGAAGACGAGAAAATCCAGGAGAGCATGAAGCTATGCGAAAAATG
AAGAATGAATTCATGGTAAATTGGGATGGTTTGCGTACAAAAGATAAGGAACGAGTGCTT
GTGCTTGCTGCAACAAATAGACCCTTCGACCTTGATGAAGCAGTTATTAGGAGGCTTCCG
CGCAGGTTGATGGTAAACATGCCAGATGCTCCAAACAGAAAGAAAATTTTAAGAGTGATA
TTGGCGAAGGAAGAATTAGCGCCAAATGTAGATGTAGAAGCTATTGCTAATATGACGGAA
GGGTACTCAGGGAGTGATTTAAAGAATTTATGTGTGACAGCTGCGCATTGCCCGATTAGA
GAAATTTTGGAGAAAGAGAAGAAGGAGAAAGCATCGGCAGTTGCAGAGAACAGGCCAACT
CCGGCATTGCGTAGTAGTGCAGACATCCGTCCACTTAACATGGATGATTTTAAGTATGCA
CATGAACAGGTATGTGCTAGTGTATCCTCGGAATCTTCAAACATGAATGAGCTTCTCCAG
TGGAATGACTTATATGGAGAAGGTGGATCAAGGAAGAAAACATCTCTCAGTTACTTCATG
TAG

Peptide Sequence

PEP ID

XP_016465976.1
PEP Infomation

PREDICTED: ATPase family AAA domain-containing protein 1-A-like, partial [Nicotiana tabacum]
Sequence

GSSKIGVRFDKSIPEGNDLGGLCDEDHGFFCAADLLRLDSSSTDEIDKLAINELFEVASN
ESKSSPLVLFIKDIEKSMVGNPEAYAAFKIKLEHLPENVVAIASLTQSDNRKEKSHPGGL
LFTKFGSNQTALLDLAFPDNFGRLHDRSKETPKTMKQLTRLFPNKVTIQIPQDETLLSDW
KQQLDRDMETMKSQSNIASIRNVLNRIRIDCPELETLCIKDQALTNESVEKIIGWALSHH
FMHESESSVKDAKLVISGERSNLIFTLCYLQPCKGILLFGPPGTGKTMLAKAVATEAGAN
FINISMSSITSKWFGEGEKYVKAVFTLASKIASSVVFVDEVDSMLGRRENPGEHEAMRKM
KNEFMVNWDGLRTKDKERVLVLAATNRPFDLDEAVIRRLPRRLMVNMPDAPNRKKILRVI
LAKEELAPNVDVEAIANMTEGYSGSDLKNLCVTAAHCPIREILEKEKKEKASAVAENRPT
PALRSSADIRPLNMDDFKYAHEQVCASVSSESSNMNELLQWNDLYGEGGSRKKTSLSYFM

Transcript Sequence

Gene sequence data has not been registered.